Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015827023.1_cds_XP_016502921.1_16512
CDS Infomation

[gene=LOC107821044] [db_xref=GeneID:107821044] [protein=zinc finger MYM-type protein 1-like] [protein_id=XP_016502921.1] [location=join(33636..35117,35225..35852,36276..36523)] [gbkey=CDS]
Sequence

ATGGATAAATTTCTCATCAAGCTAAATGTTGGCCAACCAAGCTCTAGTTTTAGTCAGCCA
TCTGCGAGTTCACAAATAAATCCAGAAATTCAAAGGGAAACACATCCTTCCCCACATTTA
GAGCTTAATTTGGAATCTCTTGAAGTGGATCCCAAAGAAAGATTACCTATTTCGAGTTAT
GGTCCTAATATTCGAGATGAAGTGAGGAGATATTATATTCAAATGGGGCCTTGTAAACCA
ATAGGCCATGTCTTTCCTAAAACTAAGTTTGGGAACAAAATGCGTCAATTTTGTCCCACT
TGGTTCAAAGGACCATATTCTCAATGGTTGGAGTATAGCATTAAAGCGGATGCTGCATTT
TGTTTATGTTGCTATTTATTCAAGAATGAACTCGAAAATCGTGGTAACGGGGGAGATACA
TTTACAAAAGACGGTTTTAGAGATTGGAACAAAGCCGTGGAAAGACTTAAGGCACATGTT
GGTGATGTGAACAATATCCATCATAAGTGTTTTAATAGGATGCATGATTTGAAAAATCAA
CGTCAATCGATTCTTTCTTCTTTTGACAAGCAAAACGAAAAAGTAAAAACTGATTATCGT
ATGCGCTTAAAAGCCTCAATAGATGTGGCAAGGTTTCTCTTAAGATCGGGATTTCCATTT
CGTGGACATGATGAAAGTAAAGATTTTGAATATAAAGGCCCTTTTCTTGAACTTTTGGAA
TGGCATGGCGATATGCATCCGGATGTGAAAAAAGTAATATTACGCCATGCTCCACAAAAT
GATATGATGATTTGTCCGACAATTCAAAAAGAGATTGTGGAAGCTTGTGTTAAAGAAACA
ACTAAAGCTATTATCGAAGACTTGGGTGGTGATTTTTTTGGAATATTAGTTGATGAATCA
AAAGACATCTCACATAAGGAGCAAATGGCTCTAATTTTGAGATATGTCAACAAAAGTGGA
ATGATTATAGAGCGATTCTTGGGTATTGTCCATGTGAGTGACACATCTTCCCAACCATTA
CAAAAAGAGATTTATTCTTTGCTTTTGAAACATTCATTAAGTCCATCCAAGATACGTGGA
CAGGGTTATGATGGTGCTAGTAATATGCAAGGGGGAAAAAATGGCCTCAAATCTTTGATT
TTGAAAGATACTCCGTCTGCATATTCTATTCATTGTTTTGCTCATCAATTGCAACTAGCA
CTTGTAGCTCTTTCTAAAAAGCATTCGGATGTGGATAGTTTTTTTTATGTTGTCACTAAT
GTTTTGAATACTATTGGAGCTTCTTTTAAGCGCAGGGTTTCACTTCGGCAACATCAATTG
GATAAATTGGAAGAGTTGATTAAAGTTGGAGAAGTTCTTACCAGACAAGGTTTGAATCAA
GAACGAGGCCTCCAACGACCGGGTGATACTCGTTGGGGGTCTCATTATAAGACCTTGGAC
AATTTCATAGTTTTATTTTCTTCAATTGTTAATGTGCTTAAAGTGTTGCTATTAACTAAT
GAATTGAACAAAGTTCTACAAAAGAAAGATCAAGATATTGTTAGTGCTATGGGAATGCTT
GACCTTGCAAAGAAAAGACTACAAAAGATGAGAGAAGAGGAATGGGACTCTTTGATGGAG
GAGGTTTGCTCATTTTGTAGTAAACATGAAATTGCAATTCCCAACATGGATGAAGACTAT
GTTATTGGAAAGTCGAAACGTAAGAGATCCGAAGTTTCCTATTTACATCACTTTCGTGTG
GAAGTATTTTATGCCGTTATTGATTTAGAGCTTCAAGAGCTTAATAGCCGTTTTGATGTA
GTGACTAGTGACTTACTCCTTGGTATGGCTAGTTTGAGTCCGGTTGATTCATTTGCAAAT
TTTGACAAGAACAAGATAATGAAACTGGCCAAGTATTATCCAAGTGAATTTGATGAAAAC
AAGCTTCGGGAACTTGGTTTTCAACTCGACACCTTCATTGTCTATGCTCAAAAGTGTGAT
AGCAAGTTTCTTAACTTGAAAGGAATTAAAGATCTTGCTAGAGTTATGGTTGAGACAAAA
GTTGATCAGACTTGGACACATGTATATTTACTTGTGAAGTTGACTTTGATTATACCTGTT
GCTACCGCAAGGAAACGCTTTTCTAAGGTCTCTTTGGGACAACTAGTGGTTCCAAGAGTC
CCGATTGTGTCAAGCGGTCCGACTAATCCTTCTGGCATACTAGACAAGTCTTCACATACT
GAGCAATGTCATCGGCTATTTGGGGTCAATAATATGCATGGCGAAGTAACGCCATGGTGC
GTTCTTCATCGGAATGGCCAGCCCACAGAGTATCATGACATTCCGTCAGAAGAGTCCTTC
GTAGATCTCCTCCTTTAG

Peptide Sequence

PEP ID

XP_016502921.1
PEP Infomation

PREDICTED: zinc finger MYM-type protein 1-like [Nicotiana tabacum]
Sequence

MDKFLIKLNVGQPSSSFSQPSASSQINPEIQRETHPSPHLELNLESLEVDPKERLPISSY
GPNIRDEVRRYYIQMGPCKPIGHVFPKTKFGNKMRQFCPTWFKGPYSQWLEYSIKADAAF
CLCCYLFKNELENRGNGGDTFTKDGFRDWNKAVERLKAHVGDVNNIHHKCFNRMHDLKNQ
RQSILSSFDKQNEKVKTDYRMRLKASIDVARFLLRSGFPFRGHDESKDFEYKGPFLELLE
WHGDMHPDVKKVILRHAPQNDMMICPTIQKEIVEACVKETTKAIIEDLGGDFFGILVDES
KDISHKEQMALILRYVNKSGMIIERFLGIVHVSDTSSQPLQKEIYSLLLKHSLSPSKIRG
QGYDGASNMQGGKNGLKSLILKDTPSAYSIHCFAHQLQLALVALSKKHSDVDSFFYVVTN
VLNTIGASFKRRVSLRQHQLDKLEELIKVGEVLTRQGLNQERGLQRPGDTRWGSHYKTLD
NFIVLFSSIVNVLKVLLLTNELNKVLQKKDQDIVSAMGMLDLAKKRLQKMREEEWDSLME
EVCSFCSKHEIAIPNMDEDYVIGKSKRKRSEVSYLHHFRVEVFYAVIDLELQELNSRFDV
VTSDLLLGMASLSPVDSFANFDKNKIMKLAKYYPSEFDENKLRELGFQLDTFIVYAQKCD
SKFLNLKGIKDLARVMVETKVDQTWTHVYLLVKLTLIIPVATARKRFSKVSLGQLVVPRV
PIVSSGPTNPSGILDKSSHTEQCHRLFGVNNMHGEVTPWCVLHRNGQPTEYHDIPSEESF
VDLLL

Transcript Sequence

Gene sequence data has not been registered.